Packages

org.gersteinlab.tyna.core.graph	Contains basic definitions of graphs, nodes and edges.
org.gersteinlab.tyna.core.io	Contains graph readers and writers.
org.gersteinlab.tyna.core.operators	Contains network operators.
org.gersteinlab.tyna.core.util	Contains utility classes useful for network analyses.
org.gersteinlab.tyna.cytoscape	Contains classes for the Cytoscape plugin.
org.gersteinlab.tyna.webapp.config	Contains classes for making system configurations.
org.gersteinlab.tyna.webapp.data	Contains classes for accessing data within the tYNA web application.
org.gersteinlab.tyna.webapp.security	Contains classes that deal with security issues, such as login and access permission.
org.gersteinlab.tyna.webapp.util	Contains utility classes useful for building the tYNA application.
org.gersteinlab.tyna.webservice	Contains classes for exposing tYNA as a webservice.